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2,611 results in Skills, Workflows, Memory, Sub-Agents · page 43 of 109
generate-image
Generate or edit images using AI models (FLUX, Gemini). Use for general-purpose image generation including photos, illustrations, artwork, visual assets, concept art, and any image that isn't a technical diagram or schematic. For flowcharts, circuits, pathways, and technical diagrams, use the scientific-schematics skill instead.
geniml
This skill should be used when working with genomic interval data (BED files) for machine learning tasks. Use for training region embeddings (Region2Vec, BEDspace), single-cell ATAC-seq analysis (scEmbed), building consensus peaks (universes), or any ML-based analysis of genomic regions. Applies to BED file collections, scATAC-seq data, chromatin accessibility datasets, and region-based genomic feature learning.
geopandas
Python library for working with geospatial vector data including shapefiles, GeoJSON, and GeoPackage files. Use when working with geographic data for spatial analysis, geometric operations, coordinate transformations, spatial joins, overlay operations, choropleth mapping, or any task involving reading/writing/analyzing vector geographic data. Supports PostGIS databases, interactive maps, and integration with matplotlib/folium/cartopy. Use for tasks like buffer analysis, spatial joins between datasets, dissolving boundaries, clipping data, calculating areas/distances, reprojecting coordinate systems, creating maps, or converting between spatial file formats.
get-available-resources
This skill should be used at the start of any computationally intensive scientific task to detect and report available system resources (CPU cores, GPUs, memory, disk space). It creates a JSON file with resource information and strategic recommendations that inform computational approach decisions such as whether to use parallel processing (joblib, multiprocessing), out-of-core computing (Dask, Zarr), GPU acceleration (PyTorch, JAX), or memory-efficient strategies. Use this skill before running analyses, training models, processing large datasets, or any task where resource constraints matter.
gh-fix-ci
Inspect GitHub PR checks with gh, pull failing GitHub Actions logs, summarize failure context, then create a fix plan and implement after user approval. Use when a user asks to debug or fix failing PR CI/CD checks on GitHub Actions and wants a plan + code changes; for external checks (e.g., Buildkite), only report the details URL and mark them out of scope.
git-manager
Use this agent when you need to manage Git operations, organize commits, clean up repository history, or optimize Git workflows. This includes deciding how to break down changes into logical commits, cleaning up messy commit history through squashing or reordering, managing branch strategies, resolving merge conflicts, performing repository maintenance, and optimizing Git workflows for collaboration. Examples: <example>Context: User has multiple uncommitted changes across different features that need to be organized. user: 'I have changes for authentication, UI updates, and bug fixes all mixed together. How should I commit these?' assistant: 'I'll use the git-manager agent to analyze your changes and create a logical commit strategy.' <commentary>Since the user needs help organizing multiple changes into logical commits, use the git-manager agent to create a proper commit strategy.</commentary></example> <example>Context: User's feature branch has a messy commit history before merging to main. user: 'My feature branch has 15 commits with typo fixes and work-in-progress commits. Can you clean this up before I merge?' assistant: 'I'll use the git-manager agent to clean up your commit history and prepare it for merge.' <commentary>Since the user needs commit history cleanup and organization, use the git-manager agent to handle the repository maintenance.</commentary></example>
git-pr-workflows-code-reviewer
Elite code review expert specializing in modern AI-powered code analysis, security vulnerabilities, performance optimization, and production reliability. Masters static analysis tools, security scanning, and configuration review with 2024/2025 best practices. Use PROACTIVELY for code quality assurance.
git-pushing
Stage, commit, and push git changes with conventional commit messages. Use when user wants to commit and push changes, mentions pushing to remote, or asks to save and push their work. Also activates when user says "push changes", "commit and push", "push this", "push to github", or similar git workflow requests.