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pydeseq2

Differential gene expression analysis (Python DESeq2). Identify DE genes from bulk RNA-seq counts, Wald tests, FDR correction, volcano/MA plots, for RNA-seq analysis.

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Install

armory install pydeseq2 --cli claude

writes the skill into.claude/skills/pydeseq2/SKILL.mdListed as compatible

Configuration
# fetches the source and writes it to:
.claude/skills/pydeseq2/SKILL.md

Needs the armory CLI · not on npm yet, build it from cli/ in the repository

What it is

Differential gene expression analysis (Python DESeq2). Identify DE genes from bulk RNA-seq counts, Wald tests, FDR correction, volcano/MA plots, for RNA-seq analysis.

When to use it

Differential gene expression analysis (Python DESeq2). Identify DE genes from bulk RNA-seq counts, Wald tests, FDR correction, volcano/MA plots, for RNA-seq analysis.

How to install / invoke

# Copy the skill into your .claude/skills/ directory
curl -sL https://raw.githubusercontent.com/davila7/claude-code-templates/main/cli-tool/components/skills/scientific/pydeseq2/SKILL.md -o .claude/skills/pydeseq2/SKILL.md

Notes

Extracted from davila7/claude-code-templates, pydeseq2 category.